Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Limnobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Limnobacter |
| Species | Limnobacter thiooxidans |
| Strain | strain DSM 13612 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | autotroph; lithotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827258 bp
Thymine Count
827624 bp
Guanine Count
941287 bp
Cytosine Count
937341 bp
Genome Length
3534063 bp
Protein-coding Genes
3187 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein l,d-transpeptidase yafk | EV673_1124 | Not Available | Positive | 1215842 - 1217137 | 49372.6 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | EV673_1125 | Not Available | Positive | 1217149 - 1217751 | 22055.3 |
| udp-2,3-diacylglucosamine hydrolase | EV673_1126 | Not Available | Positive | 1217820 - 1218656 | 31253.9 |
| serine o-acetyltransferase | EV673_1127 | Not Available | Negative | 1218728 - 1219495 | 27357.1 |
| trna/rrna methyltransferase | EV673_1128 | Not Available | Negative | 1219589 - 1220410 | 29220.2 |
| myo-inositol-1(or 4)-monophosphatase | EV673_1129 | Not Available | Positive | 1220454 - 1221221 | 27337.7 |
| dna mismatch repair protein muts | EV673_1130 | Not Available | Positive | 1221223 - 1223850 | 96172.5 |
| calcineurin-like phosphoesterase family protein | EV673_1131 | Not Available | Positive | 1223847 - 1224854 | 37688.7 |
| fkbp-type peptidyl prolyl cis-trans isomerase /apo-metallochaperone slyd | EV673_1132 | Not Available | Negative | 1224888 - 1225436 | 20072.2 |
| 50s ribosomal protein l16 3-hydroxylase | EV673_1133 | Not Available | Positive | 1225539 - 1226690 | 43397.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
