Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Limnobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Limnobacter |
| Species | Limnobacter thiooxidans |
| Strain | strain DSM 13612 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | autotroph; lithotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827258 bp
Thymine Count
827624 bp
Guanine Count
941287 bp
Cytosine Count
937341 bp
Genome Length
3534063 bp
Protein-coding Genes
3187 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monoheme cytochrome soxx (sulfur oxidation) | EV673_0993 | Not Available | Negative | 1084546 - 1085187 | 23014.4 |
| diheme cytochrome soxa (sulfur oxidation) | EV673_0994 | Not Available | Negative | 1085206 - 1086042 | 30501.4 |
| sulfur compound chelating protein soxz | EV673_0995 | Not Available | Negative | 1086082 - 1086393 | 11158.2 |
| thiosulfate-binding protein soxy | EV673_0996 | Not Available | Negative | 1086416 - 1086889 | 16363.0 |
| sulfur dehydrogenase subunit soxd | EV673_0997 | Not Available | Negative | 1086919 - 1088064 | 40902.2 |
| sulfane dehydrogenase subunit soxc | EV673_0998 | Not Available | Negative | 1088003 - 1089367 | 49889.6 |
| hypothetical protein | EV673_0999 | Not Available | Negative | 1089473 - 1089826 | 12892.7 |
| hypothetical protein | EV673_1000 | Not Available | Positive | 1089944 - 1090435 | 18054.2 |
| vit1/ccc1 family predicted fe2+/mn2+ transporter | EV673_1001 | Not Available | Negative | 1090440 - 1091156 | 24453.8 |
| lactoylglutathione lyase | EV673_1002 | Not Available | Negative | 1091166 - 1091663 | 18865.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
