Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum sp. GN12_10-3_MGM |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
599587 bp
Thymine Count
596276 bp
Guanine Count
1210734 bp
Cytosine Count
1206936 bp
Genome Length
3620525 bp
Protein-coding Genes
3426 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | EXE47_04390 | Not Available | Negative | 869123 - 870037 | 31243.3 |
| diaminopimelate decarboxylase | EXE47_04395 | Not Available | Negative | 870034 - 871410 | 48133.7 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EXE47_04400 | Not Available | Negative | 871407 - 872246 | 30005.8 |
| 4-hydroxy-tetrahydrodipicolinate reductase | EXE47_04405 | Not Available | Negative | 872304 - 873095 | 27073.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EXE47_04410 | Not Available | Negative | 873092 - 874087 | 35099.9 |
| hd domain-containing protein | EXE47_04415 | Not Available | Positive | 874484 - 875419 | 34080.3 |
| aldehyde dehydrogenase family protein | EXE47_04420 | Not Available | Negative | 875497 - 877074 | 51679.7 |
| transcriptional regulator | EXE47_04425 | Not Available | Positive | 877192 - 880926 | 131346.0 |
| pseudouridine synthase | EXE47_04430 | Not Available | Positive | 880992 - 881501 | 17602.1 |
| is701 family transposase | EXE47_04435 | Not Available | Positive | 881667 - 882336 | 25435.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
