Halorubrum sp. CGM5_25_10-8B

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. CGM5_25_10-8B is a rod-shaped archaeon that exhibits notable motility, as indicated by the presence of flagella. This morphological characteristic suggests that the organism is capable of movement, which may play a role in its adaptation to its environment. The organism has a single replicon, which is an important feature for its genomic organization and replication processes. The accession number for Halorubrum sp. CGM5_25_10-8B is SGTY00000000.1, which serves as a unique identifier for its genomic data. The simplicity of having only one replicon may provide insights into its evolutionary adaptations and metabolic efficiency, as a streamlined genome can facilitate rapid growth and reproduction in various environmental conditions. In a broader ecological context, the rod shape and flagellar motility of Halorubrum sp. CGM5_25_10-8B may enhance its ability to colonize specific niches within saline environments, where many members of the Halorubrum genus are typically found. These traits can contribute to its survival and competitive advantage in extreme habitats, such as salt flats or hypersaline lakes, where other microorganisms may struggle to thrive. Understanding these characteristics can deepen our knowledge of microbial life in extreme conditions and their ecological interactions.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. CGM5_25_10-8B
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. CGM5_25_10-8B NODE_51_length_239_cov_20.776786,

Gene Summary

Adenine Count

576924 bp

Thymine Count

574271 bp

Guanine Count

1175795 bp

Cytosine Count

1194103 bp

Genome Length

3525178 bp

Protein-coding Genes

3330 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rhomboid family intramembrane serine proteaseEXE51_02165Not AvailableNegative445026 - 44558618633.4
hypothetical proteinEXE51_02170Not AvailableNegative445659 - 44596111146.6
flippase-like domain-containing proteinEXE51_02175Not AvailablePositive446081 - 44721437755.9
alpha-1 4-glucan-protein synthaseEXE51_02180Not AvailablePositive447245 - 44842643925.1
extracellular solute-binding proteinEXE51_02185Not AvailablePositive448466 - 44961440437.2
glycosyltransferase family 39 proteinEXE51_02190Not AvailablePositive449679 - 45198280640.7
glycosyltransferase family 2 proteinEXE51_02195Not AvailableNegative452406 - 45324229649.2
gmc family oxidoreductaseEXE51_02200Not AvailableNegative453308 - 45497859879.5
gluconate 2-dehydrogenase subunit 3 family proteinEXE51_02205Not AvailableNegative454975 - 45553819134.1
iron abc transporter permeaseEXE51_02210Not AvailablePositive455652 - 45726257530.8

Displaying genes 431 – 440 of 3379 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.