Halorubrum sp. CGM5_25_10-8B

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. CGM5_25_10-8B is a rod-shaped archaeon that exhibits notable motility, as indicated by the presence of flagella. This morphological characteristic suggests that the organism is capable of movement, which may play a role in its adaptation to its environment. The organism has a single replicon, which is an important feature for its genomic organization and replication processes. The accession number for Halorubrum sp. CGM5_25_10-8B is SGTY00000000.1, which serves as a unique identifier for its genomic data. The simplicity of having only one replicon may provide insights into its evolutionary adaptations and metabolic efficiency, as a streamlined genome can facilitate rapid growth and reproduction in various environmental conditions. In a broader ecological context, the rod shape and flagellar motility of Halorubrum sp. CGM5_25_10-8B may enhance its ability to colonize specific niches within saline environments, where many members of the Halorubrum genus are typically found. These traits can contribute to its survival and competitive advantage in extreme habitats, such as salt flats or hypersaline lakes, where other microorganisms may struggle to thrive. Understanding these characteristics can deepen our knowledge of microbial life in extreme conditions and their ecological interactions.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. CGM5_25_10-8B
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. CGM5_25_10-8B NODE_51_length_239_cov_20.776786,

Gene Summary

Adenine Count

576924 bp

Thymine Count

574271 bp

Guanine Count

1175795 bp

Cytosine Count

1194103 bp

Genome Length

3525178 bp

Protein-coding Genes

3330 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hd domain-containing proteinEXE51_16970Not AvailableNegative3439663 - 344057733368.6
4-hydroxy-tetrahydrodipicolinate synthaseEXE51_16975Not AvailablePositive3440973 - 344196835099.9
4-hydroxy-tetrahydrodipicolinate reductaseEXE51_16980Not AvailablePositive3441965 - 344275627001.1
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseEXE51_16985Not AvailablePositive3442814 - 344365330019.8
diaminopimelate decarboxylaseEXE51_16990Not AvailablePositive3443650 - 344502648103.6
diaminopimelate epimeraseEXE51_16995Not AvailablePositive3445023 - 344593731285.4
m20/m25/m40 family metallo-hydrolaseEXE51_17000Not AvailablePositive3445934 - 344717542068.4
nyn domain-containing proteinEXE51_17005Not AvailableNegative3447191 - 344768818156.0
ai-2e family transporterEXE51_17010Not AvailablePositive3447842 - 344894539614.8
cell division protein ftszEXE51_17015Not AvailablePositive3449084 - 345028040462.8

Displaying genes 3291 – 3300 of 3379 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.