Halorubrum sp. CGM5_25_10-8B

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. CGM5_25_10-8B is a rod-shaped archaeon that exhibits notable motility, as indicated by the presence of flagella. This morphological characteristic suggests that the organism is capable of movement, which may play a role in its adaptation to its environment. The organism has a single replicon, which is an important feature for its genomic organization and replication processes. The accession number for Halorubrum sp. CGM5_25_10-8B is SGTY00000000.1, which serves as a unique identifier for its genomic data. The simplicity of having only one replicon may provide insights into its evolutionary adaptations and metabolic efficiency, as a streamlined genome can facilitate rapid growth and reproduction in various environmental conditions. In a broader ecological context, the rod shape and flagellar motility of Halorubrum sp. CGM5_25_10-8B may enhance its ability to colonize specific niches within saline environments, where many members of the Halorubrum genus are typically found. These traits can contribute to its survival and competitive advantage in extreme habitats, such as salt flats or hypersaline lakes, where other microorganisms may struggle to thrive. Understanding these characteristics can deepen our knowledge of microbial life in extreme conditions and their ecological interactions.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. CGM5_25_10-8B
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. CGM5_25_10-8B NODE_51_length_239_cov_20.776786,

Gene Summary

Adenine Count

576924 bp

Thymine Count

574271 bp

Guanine Count

1175795 bp

Cytosine Count

1194103 bp

Genome Length

3525178 bp

Protein-coding Genes

3330 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna uridine(34) 5-carboxymethylaminomethyl modification radical sam/gnat enzyme elp3EXE51_11640Not AvailablePositive2366606 - 236833664642.1
peptidase s8 and s53 subtilisin kexin sedolisinEXE51_11645Not AvailablePositive2368533 - 236986144832.4
fibronectin-binding domain-containing proteinEXE51_11650Not AvailablePositive2369936 - 237212280552.1
hypothetical proteinEXE51_11655Not AvailablePositive2372198 - 237259014428.5
amidophosphoribosyltransferaseEXE51_11660Not AvailablePositive2372706 - 237420553531.1
halocyanin domain-containing proteinEXE51_11665Not AvailablePositive2374305 - 237500922948.7
duf420 domain-containing proteinEXE51_11670Not AvailableNegative2375030 - 237559020192.9
Trna-leuNot AvailableNot AvailablePositive2375775 - 2375859Not Available
glu-trna(gln) amidotransferase subunit gateEXE51_11680Not AvailablePositive2376419 - 237830267074.6
hypothetical proteinEXE51_11685Not AvailablePositive2378381 - 237890518718.7

Displaying genes 2261 – 2270 of 3379 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.