Halorubrum sp. CGM4_25_10-8A

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. CGM4_25_10-8A is a rod-shaped archaeon characterized by the presence of flagella, which are likely involved in motility. This organism possesses a single replicon, indicating a streamlined genomic structure that is typical of certain archaeal species. The genome of Halorubrum sp. CGM4_25_10-8A is cataloged under the accession number SGTX00000000.1, providing a reference point for further genomic studies and comparisons within the Halorubrum genus. The rod shape and flagella suggest that Halorubrum sp. CGM4_25_10-8A may thrive in dynamic environments where movement toward favorable conditions or nutrients is advantageous. This morphology and motility could enable the organism to adapt to fluctuating ecological conditions, potentially allowing it to exploit various niches in its habitat. In terms of ecological implications, the presence of flagella in Halorubrum sp. CGM4_25_10-8A may facilitate interactions with other microorganisms and contribute to the organism's role in microbial communities, particularly in extreme environments where many species of Halorubrum are typically found. Understanding the motility mechanisms and ecological roles of Halorubrum sp. CGM4_25_10-8A can provide insights into the adaptability and resilience of extremophiles, particularly in hypersaline or other challenging habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. CGM4_25_10-8A
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. CGM4_25_10-8A NODE_75_length_240_cov_10.504425,

Gene Summary

Adenine Count

599669 bp

Thymine Count

592872 bp

Guanine Count

1208607 bp

Cytosine Count

1204877 bp

Genome Length

3611796 bp

Protein-coding Genes

3388 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEXE52_02345Not AvailableNegative460179 - 46091326673.7
cell division protein ftszEXE52_02350Not AvailableNegative461010 - 46220640446.8
ai-2e family transporterEXE52_02355Not AvailableNegative462345 - 46344839614.8
nyn domain-containing proteinEXE52_02360Not AvailablePositive463602 - 46409918166.1
m20/m25/m40 family metallo-hydrolaseEXE52_02365Not AvailableNegative464115 - 46535642098.4
diaminopimelate epimeraseEXE52_02370Not AvailableNegative465353 - 46626731244.2
diaminopimelate decarboxylaseEXE52_02375Not AvailableNegative466264 - 46764048121.7
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseEXE52_02380Not AvailableNegative467637 - 46847630019.8
4-hydroxy-tetrahydrodipicolinate reductaseEXE52_02385Not AvailableNegative468534 - 46932527045.1
4-hydroxy-tetrahydrodipicolinate synthaseEXE52_02390Not AvailableNegative469322 - 47031735099.9

Displaying genes 461 – 470 of 3448 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.