Halorubrum sp. SD626R

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. SD626R is a rod-shaped archaeon characterized by the presence of flagella, which may contribute to its motility in extreme environments. This organism is notable for having a single replicon, indicating a streamlined genomic organization. The genomic data for Halorubrum sp. SD626R can be accessed through the accession number SGTW00000000.1. As a member of the Halorubrum genus, Halorubrum sp. SD626R likely thrives in hypersaline conditions, which are typical for many halophilic archaea. The presence of flagella suggests that this organism has adaptations that facilitate movement, which is crucial for navigating its saline habitat to access nutrients or evade unfavorable conditions. The ecological role of Halorubrum sp. SD626R in its environment may include participating in the biogeochemical cycling of elements, possibly influencing the microbial community structure in hypersaline ecosystems. Its motility could also enhance its survival and competitive advantage in such extreme conditions, allowing it to exploit available resources effectively. Understanding the characteristics of Halorubrum sp. SD626R can provide insights into the diversity and adaptability of microorganisms in extreme environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. SD626R
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. SD626R NODE_1415_length_238_cov_2054.549550, whole

Gene Summary

Adenine Count

950955 bp

Thymine Count

969549 bp

Guanine Count

1957081 bp

Cytosine Count

1954704 bp

Genome Length

5946682 bp

Protein-coding Genes

6275 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna-guided pseudouridylation complex pseudouridine synthase subunit cbf5EXE53_29250Not AvailableNegative5389041 - 538952917715.9
cytidylate kinaseEXE53_29255Not AvailableNegative5389554 - 539009820584.5
3-dehydroquinate synthase iiEXE53_29260Not AvailablePositive5390099 - 539103333354.5
deoxyhypusine synthaseEXE53_29265Not AvailableNegative5391154 - 539217635782.0
nad(p)/fad-dependent oxidoreductaseEXE53_29270Not AvailableNegative5392209 - 539291125515.9
crtac1 family proteinEXE53_29275Not AvailableNegative5392945 - 539326010502.2
iron-containing alcohol dehydrogenaseEXE53_29280Not AvailablePositive5393261 - 539388121593.2
multidrug transporterEXE53_29285Not AvailablePositive5393946 - 53941316349.81
transposaseEXE53_29290Not AvailableNegative5394309 - 539535638836.5
hypothetical proteinEXE53_29295Not AvailablePositive5395588 - 539640027825.3

Displaying genes 5611 – 5620 of 6374 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.