Halorubrum sp. SD626R

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. SD626R is a rod-shaped archaeon characterized by the presence of flagella, which may contribute to its motility in extreme environments. This organism is notable for having a single replicon, indicating a streamlined genomic organization. The genomic data for Halorubrum sp. SD626R can be accessed through the accession number SGTW00000000.1. As a member of the Halorubrum genus, Halorubrum sp. SD626R likely thrives in hypersaline conditions, which are typical for many halophilic archaea. The presence of flagella suggests that this organism has adaptations that facilitate movement, which is crucial for navigating its saline habitat to access nutrients or evade unfavorable conditions. The ecological role of Halorubrum sp. SD626R in its environment may include participating in the biogeochemical cycling of elements, possibly influencing the microbial community structure in hypersaline ecosystems. Its motility could also enhance its survival and competitive advantage in such extreme conditions, allowing it to exploit available resources effectively. Understanding the characteristics of Halorubrum sp. SD626R can provide insights into the diversity and adaptability of microorganisms in extreme environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. SD626R
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. SD626R NODE_1415_length_238_cov_2054.549550, whole

Gene Summary

Adenine Count

950955 bp

Thymine Count

969549 bp

Guanine Count

1957081 bp

Cytosine Count

1954704 bp

Genome Length

5946682 bp

Protein-coding Genes

6275 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcription elongation factor spt5EXE53_23140Not AvailablePositive4493523 - 449397516349.3
archaeosortase aEXE53_23145Not AvailablePositive4494091 - 449505334838.8
mgtc/sapb family proteinEXE53_23150Not AvailablePositive4495183 - 449561015092.8
pas domain-containing sensor histidine kinaseEXE53_23155Not AvailableNegative4495611 - 449637627994.0
nad(p)/fad-dependent oxidoreductaseEXE53_23160Not AvailableNegative4496431 - 449766945027.9
duf1684 domain-containing proteinEXE53_23165Not AvailableNegative4497765 - 449835822718.6
hypothetical proteinEXE53_23170Not AvailablePositive4498498 - 449883413139.3
phosphatidylserine decarboxylaseEXE53_23175Not AvailableNegative4498854 - 449948622744.2
aaa family atpaseEXE53_23180Not AvailableNegative4499488 - 450053738214.8
carbohydrate abc transporter substrate-binding proteinEXE53_23185Not AvailablePositive4500899 - 450205341241.5

Displaying genes 4451 – 4460 of 6374 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.