Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum sp. SD626R |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950955 bp
Thymine Count
969549 bp
Guanine Count
1957081 bp
Cytosine Count
1954704 bp
Genome Length
5946682 bp
Protein-coding Genes
6275 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | EXE53_12635 | Not Available | Positive | 2533964 - 2534974 | 35800.4 |
| 4-hydroxy-tetrahydrodipicolinate reductase | EXE53_12640 | Not Available | Positive | 2534971 - 2535765 | 27104.2 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EXE53_12645 | Not Available | Positive | 2535832 - 2536671 | 30033.9 |
| diaminopimelate decarboxylase | EXE53_12650 | Not Available | Positive | 2536668 - 2538038 | 47713.4 |
| diaminopimelate epimerase | EXE53_12655 | Not Available | Positive | 2538035 - 2538982 | 32344.3 |
| m20/m25/m40 family metallo-hydrolase | EXE53_12660 | Not Available | Positive | 2538979 - 2540199 | 41119.5 |
| nyn domain-containing protein | EXE53_12665 | Not Available | Negative | 2540196 - 2540693 | 18153.0 |
| abc transporter substrate-binding protein | EXE53_12670 | Not Available | Positive | 2540833 - 2542716 | 69530.1 |
| abc transporter permease | EXE53_12675 | Not Available | Positive | 2542742 - 2543716 | 35264.8 |
| abc transporter permease | EXE53_12680 | Not Available | Positive | 2543732 - 2544916 | 42992.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
