Streptomyces tsukubensis strain VKM Ac-2618D c79

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces tsukubensis strain VKM Ac-2618D c79 is characterized by the presence of flagella, which are important for its motility and may contribute to its ecological interactions. This strain possesses a single replicon, indicating a streamlined genomic organization that can influence its adaptability and efficiency in various environments. The genomic information for this strain is cataloged under the accession number SGFG00000000.1, providing a reference for further research and analysis. The presence of flagella suggests that Streptomyces tsukubensis may have enhanced capabilities for navigating its habitat, potentially allowing it to access nutrient sources more effectively or evade unfavorable conditions. In the context of its ecological role, Streptomyces species are well-known for their ability to produce a wide array of bioactive compounds, including antibiotics. The flagella may facilitate the colonization of soil or other substrates, where these organisms thrive and compete with other microorganisms. This motility could be beneficial in finding optimal niches or in the dissemination of spores, which is crucial for the survival and propagation of the species. In summary, the combination of flagella presence and a single replicon in Streptomyces tsukubensis strain VKM Ac-2618D c79 may enhance its adaptability and ecological competitiveness, contributing to its role in soil ecosystems and its potential for biotechnological applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces tsukubensis
Strainstrain VKM Ac-2618D c79

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces tsukubensis strain VKM Ac-2618D c79
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces tsukubensis strain VKM Ac-2618D c79, whole genome

Gene Summary

Adenine Count

1108282 bp

Thymine Count

1120160 bp

Guanine Count

2890588 bp

Cytosine Count

2813130 bp

Genome Length

7938839 bp

Protein-coding Genes

6248 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinEWI31_21000Not AvailablePositive4846469 - 484730229314.3
transporterEWI31_21005Not AvailablePositive4847371 - 484896954887.1
hypothetical proteinEWI31_21010Not AvailablePositive4849188 - 485031538417.8
serine proteaseEWI31_21015Not AvailablePositive4850661 - 485110415227.2
alpha/beta hydrolaseEWI31_21020Not AvailableNegative4851247 - 485212532012.0
metal-dependent transcriptional regulatorEWI31_21025Not AvailableNegative4852942 - 485363425162.1
sugar isomerase domain-containing proteinEWI31_21030Not AvailablePositive4854046 - 485480426141.2
pyridoxamine 5'-phosphate oxidaseEWI31_21035Not AvailableNegative4855179 - 485595528549.5
citrate synthase 2EWI31_21040Not AvailablePositive4856176 - 485729740582.5
hypothetical proteinEWI31_21045Not AvailablePositive4857355 - 48575918414.07

Displaying genes 4051 – 4060 of 6338 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.