Streptomyces tsukubensis strain VKM Ac-2618D c79

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces tsukubensis strain VKM Ac-2618D c79 is characterized by the presence of flagella, which are important for its motility and may contribute to its ecological interactions. This strain possesses a single replicon, indicating a streamlined genomic organization that can influence its adaptability and efficiency in various environments. The genomic information for this strain is cataloged under the accession number SGFG00000000.1, providing a reference for further research and analysis. The presence of flagella suggests that Streptomyces tsukubensis may have enhanced capabilities for navigating its habitat, potentially allowing it to access nutrient sources more effectively or evade unfavorable conditions. In the context of its ecological role, Streptomyces species are well-known for their ability to produce a wide array of bioactive compounds, including antibiotics. The flagella may facilitate the colonization of soil or other substrates, where these organisms thrive and compete with other microorganisms. This motility could be beneficial in finding optimal niches or in the dissemination of spores, which is crucial for the survival and propagation of the species. In summary, the combination of flagella presence and a single replicon in Streptomyces tsukubensis strain VKM Ac-2618D c79 may enhance its adaptability and ecological competitiveness, contributing to its role in soil ecosystems and its potential for biotechnological applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces tsukubensis
Strainstrain VKM Ac-2618D c79

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces tsukubensis strain VKM Ac-2618D c79
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces tsukubensis strain VKM Ac-2618D c79, whole genome

Gene Summary

Adenine Count

1108282 bp

Thymine Count

1120160 bp

Guanine Count

2890588 bp

Cytosine Count

2813130 bp

Genome Length

7938839 bp

Protein-coding Genes

6248 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l13EWI31_13075Not AvailableNegative3120997 - 312144016409.1
abc-f family atp-binding cassette domain-containing proteinEWI31_13080Not AvailableNegative3121803 - 312342560172.6
hypothetical proteinEWI31_13085Not AvailableNegative3123467 - 312402419975.1
hypothetical proteinEWI31_13090Not AvailablePositive3124017 - 312467922279.7
trna pseudouridine(38-40) synthase truaEWI31_13095Not AvailableNegative3124653 - 312553432151.1
50s ribosomal protein l17EWI31_13100Not AvailableNegative3125651 - 312616618497.2
dna-directed rna polymerase subunit alphaEWI31_13105Not AvailableNegative3126444 - 312746636713.9
30s ribosomal protein s11EWI31_13110Not AvailableNegative3127661 - 312806514385.3
30s ribosomal protein s13EWI31_13115Not AvailableNegative3128131 - 312851114229.3
50s ribosomal protein l36EWI31_13120Not AvailableNegative3128709 - 31288224389.68

Displaying genes 2551 – 2560 of 6338 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.