Escherichia coli strain 10G

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 10G is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic and exhibits mobility due to the presence of flagella. This strain is characterized by its ability to thrive in a mesophilic temperature range, with an optimal growth temperature of 37°C. E. coli 10G has a unique biotic relationship, being free-living and associated with a wide array of hosts, including Homo sapiens, Gallus gallus, Bos taurus, and many others across various taxa such as Mammalia, Aves, and even certain plants like Solanum lycopersicum. The strain carries a single replicon and is surrounded by two membranes, typical of Gram-negative bacteria. E. coli 10G is notably associated with several health effects in humans and animals, including urinary tract infections (UTIs), gastrointestinal infections, and more severe conditions like septicemia and hemolytic uremic syndrome (HUS). It is also implicated in neonatal meningitis and various foodborne infections, showcasing its potential pathogenicity. Given its extensive host range and diverse health impacts, E. coli 10G highlights the ecological interconnectedness of microbiota and hosts. Its ability to cause significant health issues underscores the importance of monitoring and understanding strains like 10G, particularly in clinical and agricultural settings, where they can affect both human health and animal welfare.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain 10G

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain 10G
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain 10G NODE_1398_length_200_cov_0.988024,

Gene Summary

Adenine Count

1153960 bp

Thymine Count

1150589 bp

Guanine Count

1244345 bp

Cytosine Count

1238585 bp

Genome Length

4892007 bp

Protein-coding Genes

4931 genes

Non-Coding Genes

150 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1-deoxyxylulose-5-phosphate synthase yajoEW662_09370Not AvailablePositive1953730 - 195470436422.2
phosphatidylglycerophosphatase aEW662_09375Not AvailableNegative1954758 - 195527619419.2
thiamine-phosphate kinaseEW662_09380Not AvailableNegative1955254 - 195623135072.8
transcription antitermination factor nusbEW662_09385Not AvailableNegative1956309 - 195672815689.9
6,7-dimethyl-8-ribityllumazine synthaseEW662_09390Not AvailableNegative1956748 - 195721816157.4
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdEW662_09395Not AvailableNegative1957307 - 195841040340.7
transcriptional regulator nrdrEW662_09400Not AvailableNegative1958414 - 195886317229.9
duf3251 domain-containing proteinEW662_09405Not AvailablePositive1959014 - 195955319561.5
nucleoside-specific channel-forming protein tsxEW662_09410Not AvailablePositive1959852 - 196073633590.6
hnh nuclease family proteinEW662_09415Not AvailableNegative1960913 - 196126013364.7

Displaying genes 1931 – 1940 of 5089 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total