Amycolatopsis suaedae strain 8-3EHSu

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis suaedae strain 8-3EHSu is characterized by the presence of flagella, which suggests a capacity for motility. This trait may confer advantages in various environments, allowing the organism to navigate toward favorable conditions or resources. The strain has a single replicon, indicating a streamlined genomic organization that may facilitate efficient replication and maintenance of its genetic material. The strain's genomic information is cataloged under the accession SFCC00000000.1, providing a reference for researchers interested in its genetic and biochemical properties. Such genomic data can offer insights into the metabolic pathways and potential biotechnological applications of this strain. In the broader ecological context, the motility afforded by flagella may enable Amycolatopsis suaedae strain 8-3EHSu to colonize diverse environments, including soil or aquatic habitats where it could play a role in nutrient cycling or interact with other microbial communities. Understanding its ecological niche could highlight its potential contributions to ecosystem dynamics, particularly in environments where it may influence the availability of nutrients or engage in symbiotic relationships with plants or other microorganisms. Overall, the traits of this strain illustrate its capability to adapt and thrive in various ecological settings.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis suaedae
Strainstrain 8-3EHSu

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis suaedae strain 8-3EHSu

Gene Summary

Adenine Count

1089173 bp

Thymine Count

1087522 bp

Guanine Count

2686456 bp

Cytosine Count

2681076 bp

Genome Length

7545839 bp

Protein-coding Genes

6858 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-arabinose isomeraseEWH70_26355Not AvailablePositive5624041 - 562554353569.2
sugar abc transporter substrate-binding proteinEWH70_26360Not AvailablePositive5625570 - 562666138598.6
atp-binding cassette domain-containing proteinEWH70_26365Not AvailablePositive5626658 - 562819955671.1
sugar abc transporter permeaseEWH70_26370Not AvailablePositive5628196 - 562944042541.2
hypothetical proteinEWH70_26375Not AvailableNegative5630715 - 563105312920.3
hypothetical proteinEWH70_26380Not AvailableNegative5631050 - 563154118319.7
stas domain-containing proteinEWH70_26385Not AvailableNegative5631637 - 563192710352.5
glycosyltransferase family 39 proteinEWH70_26390Not AvailablePositive5632266 - 563373852604.4
sdr family nad(p)-dependent oxidoreductaseEWH70_26395Not AvailablePositive5633447 - 5639275203836.0
sdr family nad(p)-dependent oxidoreductaseEWH70_26400Not AvailablePositive5639311 - 5647068270868.0

Displaying genes 5231 – 5240 of 6934 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.