Amycolatopsis suaedae strain 8-3EHSu

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis suaedae strain 8-3EHSu is characterized by the presence of flagella, which suggests a capacity for motility. This trait may confer advantages in various environments, allowing the organism to navigate toward favorable conditions or resources. The strain has a single replicon, indicating a streamlined genomic organization that may facilitate efficient replication and maintenance of its genetic material. The strain's genomic information is cataloged under the accession SFCC00000000.1, providing a reference for researchers interested in its genetic and biochemical properties. Such genomic data can offer insights into the metabolic pathways and potential biotechnological applications of this strain. In the broader ecological context, the motility afforded by flagella may enable Amycolatopsis suaedae strain 8-3EHSu to colonize diverse environments, including soil or aquatic habitats where it could play a role in nutrient cycling or interact with other microbial communities. Understanding its ecological niche could highlight its potential contributions to ecosystem dynamics, particularly in environments where it may influence the availability of nutrients or engage in symbiotic relationships with plants or other microorganisms. Overall, the traits of this strain illustrate its capability to adapt and thrive in various ecological settings.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis suaedae
Strainstrain 8-3EHSu

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis suaedae strain 8-3EHSu

Gene Summary

Adenine Count

1089173 bp

Thymine Count

1087522 bp

Guanine Count

2686456 bp

Cytosine Count

2681076 bp

Genome Length

7545839 bp

Protein-coding Genes

6858 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
site-specific dna-methyltransferaseEWH70_20495Not AvailablePositive4366841 - 436757527274.3
type ii site-specific deoxyribonucleaseEWH70_20500Not AvailablePositive4367861 - 436872732344.8
restriction endonucleaseEWH70_20505Not AvailablePositive4368791 - 436975635126.2
dna cytosine methyltransferaseEWH70_20510Not AvailableNegative4369898 - 437103442113.3
very short patch repair endonucleaseEWH70_20515Not AvailableNegative4371066 - 437148515919.0
dgqhr domain-containing proteinEWH70_20520Not AvailablePositive4372316 - 437351843584.5
Trna-argNot AvailableNot AvailablePositive4374086 - 4374158Not Available
Trna-serNot AvailableNot AvailablePositive4374215 - 4374304Not Available
acetoacetate--coa ligaseEWH70_20535Not AvailableNegative4374390 - 437635170783.0
esx secretion-associated protein espgEWH70_20540Not AvailableNegative4376363 - 437714227742.0

Displaying genes 4081 – 4090 of 6934 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.