Escherichia coli O25b:H4 strain C0064-PB_2013 unitig_0

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli O25b:H4 strain C0064-PB_2013 unitig_0
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli O25b:H4 strain C0064-PB_2013 unitig_0

Accession NumberSEVR00000000.1

Gene Summary

Adenine Count

1310914 bp

Thymine Count

1314750 bp

Guanine Count

1362544 bp

Cytosine Count

1354038 bp

Genome Length

5342696 bp

Protein-coding Genes

4675 genes

Non-Coding Genes

523 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hok/gef family proteinEWT25_00450Not Available+71407 - 715475226.58
Gp287EWT25_00455Not Available-71853 - 7314548416.8
Gp70EWT25_00460Not Available-73236 - 7457949656.9
outer membrane lipoprotein chaperone lolaEWT25_00465Not Available-74590 - 7520122498.2
Gp201EWT25_00470Not Available-75360 - 79466151110.0
AttlNot AvailableNot Available+3936124 - 3936135Not Available
Prophage p4 integraseEWT25_19065Not Available-3943676 - 394493848023.4
Trna,type:asn,anti_codon:gtt;Not AvailableNot Available+3945100 - 3945175Not Available
dgsa anti-repressor mtfaEWT25_19075Not Available-3945276 - 394607330253.7
Trna,type:ser,anti_codon:cga;Not AvailableNot Available+3946167 - 3946256Not Available

Displaying genes 81 – 90 of 5208 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites