Escherichia coli O25b:H4 strain C0107-PB_2013 unitig_1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli O25b:H4 strain C0107-PB_2013 unitig_1
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli O25b:H4 strain C0107-PB_2013 unitig_1

Accession NumberSEVQ00000000.1

Gene Summary

Adenine Count

1332359 bp

Thymine Count

1327240 bp

Guanine Count

1371774 bp

Cytosine Count

1370781 bp

Genome Length

5402229 bp

Protein-coding Genes

4690 genes

Non-Coding Genes

563 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Repressor protein cEWT47_00345Not Available+54000 - 5434112446.2
AttrNot AvailableNot Available+54231 - 54243Not Available
Tyrosine-type recombinase/integraseEWT47_00350Not Available+54411 - 5540337952.0
Dimethyl sulfoxide reductase dmsaEWT47_00355Not Available+55703 - 5814790410.7
Anaerobic dimethyl sulfoxide reductase subunit bEWT47_00360Not Available+58158 - 5877522870.1
Dmso reductase anchor subunit cEWT47_00365Not Available+58777 - 5964030827.2
AttlNot AvailableNot Available+57174 - 57186Not Available
Recombinase family proteinEWT47_00415Not Available-71872 - 7244421638.7
Tail fiber proteinEWT47_00420Not Available+72504 - 7302818816.6
Tail fiber assembly proteinEWT47_00425Not Available+73028 - 7364222281.8

Displaying genes 61 – 70 of 5253 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites