Escherichia coli O25b:H4 strain B1212-PB_2012 unitig_2

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli O25b:H4 strain B1212-PB_2012 unitig_2 is a Gram-negative, rod-shaped bacterium that is characterized by its ability to exist in host-associated environments. This strain exhibits a cell arrangement of pairs and singles and is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic conditions. The optimal temperature for growth is 37°C, which is within the mesophilic temperature range, highlighting its adaptability to warm-blooded hosts. This strain is motile, possessing flagella that enable it to move effectively within its habitat. E. coli O25b:H4 strain B1212-PB_2012 has a single replicon and is surrounded by two membranes, typical of Gram-negative bacteria. It displays a free-living biotic relationship, suggesting that while it may be found in association with hosts, it is capable of independent existence in various environments. The accession number for this strain is SEVH00000000.1, providing a reference for further genomic studies. Understanding the traits of E. coli O25b:H4 strain B1212-PB_2012 can contribute to our knowledge of its ecological role, particularly in relation to its adaptability and mobility in diverse habitats. Its facultative anaerobic nature and mesophilic growth preferences indicate potential interactions with both environmental and host-associated microbial communities, reinforcing its significance in microbiological research and potential implications in health and disease contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainO25b:H4 strain B1212-PB_2012 unitig_2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli O25b:H4 strain B1212-PB_2012 unitig_2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli O25b:H4 strain B1212-PB_2012 unitig_2


Gene Summary

Adenine Count

1306879 bp

Thymine Count

1308628 bp

Guanine Count

1359308 bp

Cytosine Count

1345879 bp

Genome Length

5321227 bp

Protein-coding Genes

4610 genes

Non-Coding Genes

587 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ketoacyl-acp synthase iiiEWT41_02955Not AvailableNegative511624 - 51263135711.2
respiratory nitrate reductase subunit gammaEWT41_02960Not AvailableNegative512759 - 51343625484.9
nitrate reductase molybdenum cofactor assembly chaperoneEWT41_02965Not AvailableNegative513436 - 51414626450.3
nitrate reductase subunit betaEWT41_02970Not AvailableNegative514143 - 51568158083.6
nitrate reductase subunit alphaEWT41_02975Not AvailableNegative515678 - 519421140597.0
nark family nitrate/nitrite mfs transporterEWT41_02980Not AvailableNegative519814 - 52120549696.3
nitrate/nitrite two-component system sensor histidine kinase narxEWT41_02985Not AvailablePositive521544 - 52334067102.0
two-component system response regulator narlEWT41_02990Not AvailablePositive523333 - 52398323928.3
inverse autotransporter invasin ychoEWT41_02995Not AvailableNegative523984 - 52537852170.7
dsre/f sulfur relay family protein ychnEWT41_03000Not AvailablePositive525563 - 52591612720.6

Displaying genes 901 – 910 of 5207 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.