Escherichia coli O25b:H4 strain B1212-PB_2012 unitig_2

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli O25b:H4 strain B1212-PB_2012 unitig_2 is a Gram-negative, rod-shaped bacterium that is characterized by its ability to exist in host-associated environments. This strain exhibits a cell arrangement of pairs and singles and is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic conditions. The optimal temperature for growth is 37°C, which is within the mesophilic temperature range, highlighting its adaptability to warm-blooded hosts. This strain is motile, possessing flagella that enable it to move effectively within its habitat. E. coli O25b:H4 strain B1212-PB_2012 has a single replicon and is surrounded by two membranes, typical of Gram-negative bacteria. It displays a free-living biotic relationship, suggesting that while it may be found in association with hosts, it is capable of independent existence in various environments. The accession number for this strain is SEVH00000000.1, providing a reference for further genomic studies. Understanding the traits of E. coli O25b:H4 strain B1212-PB_2012 can contribute to our knowledge of its ecological role, particularly in relation to its adaptability and mobility in diverse habitats. Its facultative anaerobic nature and mesophilic growth preferences indicate potential interactions with both environmental and host-associated microbial communities, reinforcing its significance in microbiological research and potential implications in health and disease contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainO25b:H4 strain B1212-PB_2012 unitig_2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli O25b:H4 strain B1212-PB_2012 unitig_2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli O25b:H4 strain B1212-PB_2012 unitig_2


Gene Summary

Adenine Count

1306879 bp

Thymine Count

1308628 bp

Guanine Count

1359308 bp

Cytosine Count

1345879 bp

Genome Length

5321227 bp

Protein-coding Genes

4610 genes

Non-Coding Genes

587 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyrimidine utilization flavin reductase protein fEWT41_01030Not AvailableNegative175866 - 17636017747.3
malonic semialdehyde reductaseEWT41_01035Not AvailableNegative176371 - 17696121575.5
pyrimidine utilization protein dEWT41_01040Not AvailableNegative176971 - 17777128925.8
pyrimidine utilization protein cEWT41_01045Not AvailableNegative177779 - 17816513763.6
pyrimidine utilization protein bEWT41_01050Not AvailableNegative178177 - 17886925220.0
pyrimidine utilization protein aEWT41_01055Not AvailableNegative178869 - 17996039959.4
hth-type transcriptional regulator rutrEWT41_01060Not AvailablePositive180248 - 18088623688.9
trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenaseEWT41_01065Not AvailableNegative180926 - 184888143839.0
hypothetical proteinEWT41_01070Not AvailablePositive184943 - 1851527765.84
sodium/proline symporter putpEWT41_01075Not AvailablePositive185311 - 18681954236.2

Displaying genes 671 – 680 of 5207 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.