Klebsiella pneumoniae strain KP3CR KP3CR_84

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain KP3CR (accession SETY00000000.1) is a gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, primarily functioning as a chemoheterotroph. This strain is associated with various hosts, including humans (Homo sapiens), birds (Gallus gallus, Phasianidae, Aves), and several other vertebrates and invertebrates such as Danio rerio and Sus scrofa. The organism is characterized by its mobility, facilitated by the presence of flagella, and typically exists in chains, pairs, or as single cells. With an optimal growth temperature of 37°C, KP3CR is classified as mesophilic, thriving in moderate temperature environments. It possesses a single replicon and is enclosed by a double membrane, which is typical for gram-negative bacteria. Klebsiella pneumoniae KP3CR is notable for its pathogenicity in humans, being implicated in a wide range of health complications. These include bacteremia, urinary tract infections, pneumonia, and more severe conditions such as sepsis and meningitis. The organism's ability to cause infections extends to various anatomical sites, leading to conditions like liver abscesses and pyogenic liver abscesses. In terms of ecological roles, KP3CR is classified as free-living, indicating its capacity to thrive independently in various environments. Its diverse host range and pathogenic potential underscore its significance in both clinical and environmental microbiology, highlighting the complex interactions between pathogens and their hosts in different ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain KP3CR KP3CR_84

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain KP3CR KP3CR_84
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain KP3CR KP3CR_84, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5231 genes

Non-Coding Genes

240 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tail tape measure proteinEWP73_09575Not AvailablePositive1869706 - 1872633101533.0
Tail proteinEWP73_09580Not AvailablePositive1872645 - 187313318285.8
Tail proteinEWP73_09585Not AvailableNegative1873262 - 187440441124.1
Hypothetical proteinEWP73_09590Not AvailableNegative1874420 - 187522328742.1
Tail fiber proteinEWP73_09595Not AvailableNegative1875220 - 187749983267.1
Tail fibers proteinEWP73_09600Not AvailableNegative1877501 - 187810322540.8
Baseplate j/gp47 family proteinEWP73_09605Not AvailableNegative1878096 - 187899531793.3
Baseplate assembly proteinEWP73_09610Not AvailableNegative1878982 - 187934713087.7
Baseplate assembly protein vEWP73_09615Not AvailableNegative1879344 - 187992820948.6
Virion morphogenesis proteinEWP73_09620Not AvailableNegative1879928 - 188056924217.9

Displaying genes 31 – 40 of 5476 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total