Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GEN000185 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1313826 bp
Thymine Count
1321775 bp
Guanine Count
1343809 bp
Cytosine Count
1338423 bp
Genome Length
5329909 bp
Protein-coding Genes
4768 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | EVY21_22275 | Not Available | Negative | 4606508 - 4608538 | 75831.6 |
| protein bax | EVY21_22280 | Not Available | Positive | 4608858 - 4609682 | 30903.3 |
| xylose operon transcription regulator xylr | EVY21_22285 | Not Available | Negative | 4609790 - 4610968 | 44871.7 |
| xylose abc transporter permease | EVY21_22290 | Not Available | Negative | 4611046 - 4612227 | 41033.5 |
| d-xylose abc transporter atp-binding protein | EVY21_22295 | Not Available | Negative | 4612205 - 4613746 | 56477.9 |
| d-xylose abc transporter substrate-binding protein | EVY21_22300 | Not Available | Negative | 4613824 - 4614816 | 35722.1 |
| xylose isomerase | EVY21_22305 | Not Available | Positive | 4615182 - 4616504 | 49721.7 |
| xylulokinase | EVY21_22310 | Not Available | Positive | 4616576 - 4618030 | 52684.4 |
| hypothetical protein | EVY21_22315 | Not Available | Positive | 4618199 - 4618540 | 12557.0 |
| yiab family inner membrane protein | EVY21_22320 | Not Available | Positive | 4618586 - 4619023 | 16105.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





