Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GEN000185 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1313826 bp
Thymine Count
1321775 bp
Guanine Count
1343809 bp
Cytosine Count
1338423 bp
Genome Length
5329909 bp
Protein-coding Genes
4768 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ykgj family cysteine cluster protein | EVY21_18935 | Not Available | Negative | 3927652 - 3927981 | 11799.1 |
| hypothetical protein | EVY21_18940 | Not Available | Negative | 3928294 - 3929004 | 26650.7 |
| fimbrial adhesin ecpd | EVY21_18945 | Not Available | Negative | 3928973 - 3930616 | 59949.1 |
| fimbrial biogenesis outer membrane usher protein | EVY21_18950 | Not Available | Negative | 3930606 - 3933131 | 91320.8 |
| fimbrial chaperone ecpb | EVY21_18955 | Not Available | Negative | 3933157 - 3933825 | 24484.3 |
| common pilus major fimbrillin subunit ecpa | EVY21_18960 | Not Available | Negative | 3933883 - 3934470 | 20110.5 |
| luxr family transcriptional regulator | EVY21_18965 | Not Available | Negative | 3934545 - 3935087 | 21231.8 |
| hypothetical protein | EVY21_18970 | Not Available | Positive | 3935559 - 3935942 | 14189.6 |
| 50s ribosomal protein l36 | EVY21_18980 | Not Available | Negative | 3936171 - 3936311 | 5466.94 |
| type b 50s ribosomal protein l31 | EVY21_18985 | Not Available | Negative | 3936311 - 3936574 | 9920.71 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





