Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GEN000185 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1313826 bp
Thymine Count
1321775 bp
Guanine Count
1343809 bp
Cytosine Count
1338423 bp
Genome Length
5329909 bp
Protein-coding Genes
4768 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe3+-hydroxamate abc transporter atp-binding protein fhuc | EVY21_16565 | Not Available | Negative | 3398237 - 3399034 | 28872.2 |
| ferrichrome porin fhua | EVY21_16570 | Not Available | Negative | 3399085 - 3401343 | 83026.5 |
| bifunctional glycosyl transferase/transpeptidase | EVY21_16575 | Not Available | Negative | 3401563 - 3404097 | 94269.9 |
| atp-dependent helicase hrpb | EVY21_16580 | Not Available | Negative | 3404191 - 3406620 | 89276.4 |
| rna 2',3'-cyclic phosphodiesterase | EVY21_16585 | Not Available | Positive | 3406694 - 3407224 | 19956.1 |
| dna/rna nuclease sfsa | EVY21_16590 | Not Available | Positive | 3407239 - 3407943 | 26230.2 |
| rna polymerase-binding transcription factor dksa | EVY21_16595 | Not Available | Positive | 3408121 - 3408576 | 17528.7 |
| trna glutamyl-q(34) synthetase gluqrs | EVY21_16600 | Not Available | Positive | 3408613 - 3409539 | 34915.5 |
| polynucleotide adenylyltransferase pcnb | EVY21_16605 | Not Available | Positive | 3409578 - 3410996 | 54659.0 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | EVY21_16610 | Not Available | Positive | 3410993 - 3411472 | 18039.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





