Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GEN000185 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1313826 bp
Thymine Count
1321775 bp
Guanine Count
1343809 bp
Cytosine Count
1338423 bp
Genome Length
5329909 bp
Protein-coding Genes
4768 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase amia | EVY21_15195 | Not Available | Negative | 3123195 - 3124064 | 31466.9 |
| acetyltransferase ypea | EVY21_15200 | Not Available | Positive | 3124278 - 3124703 | 16326.6 |
| duf2919 domain-containing protein | EVY21_15205 | Not Available | Positive | 3124690 - 3125139 | 17129.3 |
| rpoe-regulated lipoprotein | EVY21_15210 | Not Available | Positive | 3125200 - 3125775 | 20859.6 |
| dyp-type peroxidase | EVY21_15215 | Not Available | Positive | 3125871 - 3126770 | 33086.2 |
| penicillin binding protein pbp4b | EVY21_15220 | Not Available | Negative | 3126828 - 3128129 | 47403.6 |
| pts n-acetylmuramic acid transporter subunits iibc | EVY21_15225 | Not Available | Negative | 3128134 - 3129558 | 49785.0 |
| n-acetylmuramic acid 6-phosphate etherase | EVY21_15230 | Not Available | Negative | 3129562 - 3130458 | 31073.7 |
| hth-type transcriptional regulator murr | EVY21_15235 | Not Available | Positive | 3130622 - 3131479 | 31356.8 |
| sdr family oxidoreductase ucpa | EVY21_15240 | Not Available | Positive | 3131608 - 3132399 | 27865.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





