Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GEN000185 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1313826 bp
Thymine Count
1321775 bp
Guanine Count
1343809 bp
Cytosine Count
1338423 bp
Genome Length
5329909 bp
Protein-coding Genes
4768 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ypfn family protein | EVY21_15045 | Not Available | Negative | 3090283 - 3090483 | 8071.78 |
| succinyl-diaminopimelate desuccinylase | EVY21_15050 | Not Available | Negative | 3090511 - 3091638 | 41271.4 |
| arsc family reductase | EVY21_15055 | Not Available | Negative | 3091642 - 3091998 | 13559.3 |
| hypothetical protein | EVY21_15060 | Not Available | Positive | 3092379 - 3092438 | 2408.02 |
| multidrug efflux rnd transporter permease acrd | EVY21_15065 | Not Available | Negative | 3092537 - 3095650 | 113071.0 |
| nitrate/nitrite two-component system sensor histidine kinase narq | EVY21_15070 | Not Available | Negative | 3095814 - 3097514 | 63659.6 |
| oxidoreductase fes-binding subunit | EVY21_15075 | Not Available | Positive | 3097720 - 3099699 | 71911.1 |
| gdp-mannose pyrophosphatase nudk | EVY21_15080 | Not Available | Positive | 3099767 - 3100342 | 21706.9 |
| duf1176 domain-containing protein | EVY21_15085 | Not Available | Positive | 3100468 - 3101511 | 38742.5 |
| transketolase | EVY21_15090 | Not Available | Negative | 3101614 - 3103617 | 73046.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





