Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GEN000185 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1313826 bp
Thymine Count
1321775 bp
Guanine Count
1343809 bp
Cytosine Count
1338423 bp
Genome Length
5329909 bp
Protein-coding Genes
4768 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EVY21_13775 | Not Available | Positive | 2812025 - 2813173 | 41462.2 |
| amino acid permease | EVY21_13780 | Not Available | Positive | 2813383 - 2814813 | 52557.6 |
| pyruvate formate lyase 1-activating protein | EVY21_13790 | Not Available | Negative | 2815023 - 2815763 | 28236.9 |
| formate c-acetyltransferase | EVY21_13795 | Not Available | Negative | 2815955 - 2818237 | 85355.0 |
| formate transporter foca | EVY21_13800 | Not Available | Negative | 2818292 - 2819149 | 30992.6 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | EVY21_13805 | Not Available | Negative | 2819555 - 2821315 | 65649.0 |
| duf421 domain-containing protein | EVY21_13810 | Not Available | Positive | 2821445 - 2822137 | 26269.4 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | EVY21_13815 | Not Available | Positive | 2822336 - 2823424 | 39842.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | EVY21_13820 | Not Available | Positive | 2823495 - 2824778 | 46165.7 |
| hypothetical protein | EVY21_13825 | Not Available | Positive | 2825107 - 2825160 | 2056.38 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





