Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GEN000185 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1313826 bp
Thymine Count
1321775 bp
Guanine Count
1343809 bp
Cytosine Count
1338423 bp
Genome Length
5329909 bp
Protein-coding Genes
4768 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase subunit hycd | EVY21_13315 | Not Available | Negative | 2714296 - 2715219 | 33059.4 |
| formate hydrogenlyase subunit 3 | EVY21_13320 | Not Available | Negative | 2715222 - 2717048 | 64099.1 |
| 4fe-4s dicluster domain-containing protein | EVY21_13325 | Not Available | Negative | 2717045 - 2717656 | 21874.4 |
| formate hydrogenlyase regulator hyca | EVY21_13330 | Not Available | Negative | 2717781 - 2718242 | 17672.0 |
| hypothetical protein | EVY21_13335 | Not Available | Negative | 2718330 - 2718548 | 8011.78 |
| hydrogenase maturation nickel metallochaperone hypa | EVY21_13340 | Not Available | Positive | 2718454 - 2718804 | 13201.0 |
| hydrogenase nickel incorporation protein hypb | EVY21_13345 | Not Available | Positive | 2718808 - 2719680 | 31566.8 |
| hypc/hybg/hupf family hydrogenase formation chaperone | EVY21_13350 | Not Available | Positive | 2719671 - 2719943 | 9732.58 |
| hydrogenase formation protein hypd | EVY21_13355 | Not Available | Positive | 2719943 - 2721064 | 41366.7 |
| hydrogenase expression/formation protein hype | EVY21_13360 | Not Available | Positive | 2721061 - 2722071 | 35066.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





