Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GEN000185 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1313826 bp
Thymine Count
1321775 bp
Guanine Count
1343809 bp
Cytosine Count
1338423 bp
Genome Length
5329909 bp
Protein-coding Genes
4768 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adhesin-like autotransporter ypja | EVY21_12960 | Not Available | Negative | 2643875 - 2648443 | 157305.0 |
| atpase | EVY21_12965 | Not Available | Negative | 2648508 - 2648627 | 4328.2 |
| hypothetical protein | EVY21_12970 | Not Available | Negative | 2648782 - 2649048 | 9878.23 |
| Trna-met | Not Available | Not Available | Positive | 2651575 - 2651650 | Not Available |
| hypothetical protein | EVY21_12985 | Not Available | Positive | 2652208 - 2654460 | 85158.1 |
| carbon starvation induced protein csid | EVY21_12990 | Not Available | Positive | 2654797 - 2655774 | 37397.6 |
| l-2-hydroxyglutarate oxidase | EVY21_12995 | Not Available | Positive | 2655794 - 2657062 | 46127.7 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | EVY21_13000 | Not Available | Positive | 2657085 - 2658533 | 51790.2 |
| 4-aminobutyrate--2-oxoglutarate transaminase | EVY21_13005 | Not Available | Positive | 2658547 - 2659827 | 45606.3 |
| gaba permease | EVY21_13010 | Not Available | Positive | 2660064 - 2661464 | 51083.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





