Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GEN000185 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1313826 bp
Thymine Count
1321775 bp
Guanine Count
1343809 bp
Cytosine Count
1338423 bp
Genome Length
5329909 bp
Protein-coding Genes
4768 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1266 domain-containing protein | EVY21_08410 | Not Available | Negative | 1714021 - 1714728 | 27839.6 |
| hypothetical protein | EVY21_08415 | Not Available | Positive | 1714892 - 1715869 | 37214.1 |
| zinc ribbon-containing protein | EVY21_08420 | Not Available | Negative | 1715940 - 1716422 | 18798.2 |
| leucine--trna ligase | EVY21_08425 | Not Available | Positive | 1716657 - 1719239 | 97270.0 |
| lps assembly lipoprotein lpte | EVY21_08430 | Not Available | Positive | 1719254 - 1719835 | 21357.8 |
| dna polymerase iii subunit delta | EVY21_08435 | Not Available | Positive | 1719835 - 1720866 | 38732.1 |
| nicotinate-nucleotide adenylyltransferase | EVY21_08440 | Not Available | Positive | 1720868 - 1721509 | 24529.3 |
| adenosylcobalamin/alpha-ribazole phosphatase | EVY21_08445 | Not Available | Positive | 1721533 - 1722144 | 23396.8 |
| ribosome silencing factor | EVY21_08450 | Not Available | Positive | 1722404 - 1722721 | 11582.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | EVY21_08455 | Not Available | Positive | 1722725 - 1723192 | 17342.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





