Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GEN000185 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1313826 bp
Thymine Count
1321775 bp
Guanine Count
1343809 bp
Cytosine Count
1338423 bp
Genome Length
5329909 bp
Protein-coding Genes
4768 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts mannose/fructose/sorbose transporter subunit iic | EVY21_06775 | Not Available | Positive | 1366299 - 1367096 | 28032.2 |
| pts system mannose/fructose/sorbose family transporter subunit iid | EVY21_06780 | Not Available | Positive | 1367107 - 1367931 | 29457.9 |
| l-sorbose 1-phosphate reductase | EVY21_06785 | Not Available | Positive | 1367983 - 1369212 | 44746.1 |
| shikimate 5-dehydrogenase | EVY21_06790 | Not Available | Positive | 1369205 - 1370017 | 29136.2 |
| dipeptidase pepe | EVY21_06795 | Not Available | Positive | 1370140 - 1370829 | 24571.7 |
| na/pi cotransporter family protein | EVY21_06800 | Not Available | Negative | 1370919 - 1372550 | 59480.7 |
| methionine synthase | EVY21_06805 | Not Available | Negative | 1372770 - 1376453 | 136027.0 |
| glyoxylate bypass operon transcriptional repressor iclr | EVY21_06810 | Not Available | Positive | 1376653 - 1377477 | 29741.1 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | EVY21_06815 | Not Available | Negative | 1377494 - 1379218 | 67130.6 |
| isocitrate lyase | EVY21_06820 | Not Available | Negative | 1379402 - 1380706 | 47524.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





