Yimella sp. RIT 621 strain RIT621 48

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Dermacoccaceae

Genus

Yimella

Description

Yimella sp. RIT 621 strain RIT621 48 is characterized by a single replicon, indicating a straightforward genomic organization that may facilitate its growth and adaptation in various environments. The strain is cataloged under the accession number SEIP00000000.1, which provides a reference for its genomic data in biological databases. As a member of the Yimella genus, this strain is likely to exhibit metabolic versatility, a trait common among members of this group. While specific metabolic capabilities of Yimella sp. RIT 621 have not been detailed in the provided data, strains within the genus are generally known for their potential roles in biogeochemical cycles and their interactions within microbial communities. The presence of a single replicon may suggest a streamlined genetic architecture that could enhance its adaptability and survival in fluctuating environmental conditions. This adaptability is crucial for the strain's ecological interactions, potentially allowing it to thrive in specific niches where competition is high. In summary, Yimella sp. RIT 621 strain RIT621 48, with its single replicon and registered accession, likely plays a role in microbial ecosystems, possibly contributing to nutrient cycling and influencing community dynamics. Further research could elucidate its specific functions and interactions within its habitat, enhancing our understanding of microbial ecology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDermacoccaceae
GenusYimella
SpeciesYimella sp. RIT 621
Strainstrain RIT621 48

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yimella sp. RIT 621 strain RIT621 48, whole genome shotgun

Gene Summary

Adenine Count

542077 bp

Thymine Count

537412 bp

Guanine Count

1092953 bp

Cytosine Count

1099336 bp

Genome Length

3275060 bp

Protein-coding Genes

2975 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ybak/ebsc family proteinEU513_08615Not AvailableNegative1787745 - 178821516596.6
allantoate amidohydrolaseEU513_08620Not AvailablePositive1788269 - 178945341696.8
hypothetical proteinEU513_08625Not AvailablePositive1789453 - 17896748257.03
formimidoylglutamate deiminaseEU513_08630Not AvailablePositive1789671 - 179103849548.9
imidazolonepropionaseEU513_08635Not AvailablePositive1791035 - 179223141957.5
duf4333 domain-containing proteinEU513_08640Not AvailableNegative1792286 - 179259410940.0
2-oxo acid dehydrogenase subunit e2EU513_08645Not AvailableNegative1792667 - 179400146722.4
alpha-ketoacid dehydrogenase subunit betaEU513_08650Not AvailableNegative1793943 - 179497437111.1
thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alphaEU513_08655Not AvailableNegative1794971 - 179609541049.5
lrp/asnc family transcriptional regulatorEU513_08660Not AvailablePositive1796161 - 179668518817.3

Displaying genes 1681 – 1690 of 3027 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.