Yimella sp. RIT 621 strain RIT621 48

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Dermacoccaceae

Genus

Yimella

Description

Yimella sp. RIT 621 strain RIT621 48 is characterized by a single replicon, indicating a straightforward genomic organization that may facilitate its growth and adaptation in various environments. The strain is cataloged under the accession number SEIP00000000.1, which provides a reference for its genomic data in biological databases. As a member of the Yimella genus, this strain is likely to exhibit metabolic versatility, a trait common among members of this group. While specific metabolic capabilities of Yimella sp. RIT 621 have not been detailed in the provided data, strains within the genus are generally known for their potential roles in biogeochemical cycles and their interactions within microbial communities. The presence of a single replicon may suggest a streamlined genetic architecture that could enhance its adaptability and survival in fluctuating environmental conditions. This adaptability is crucial for the strain's ecological interactions, potentially allowing it to thrive in specific niches where competition is high. In summary, Yimella sp. RIT 621 strain RIT621 48, with its single replicon and registered accession, likely plays a role in microbial ecosystems, possibly contributing to nutrient cycling and influencing community dynamics. Further research could elucidate its specific functions and interactions within its habitat, enhancing our understanding of microbial ecology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDermacoccaceae
GenusYimella
SpeciesYimella sp. RIT 621
Strainstrain RIT621 48

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yimella sp. RIT 621 strain RIT621 48, whole genome shotgun

Gene Summary

Adenine Count

542077 bp

Thymine Count

537412 bp

Guanine Count

1092953 bp

Cytosine Count

1099336 bp

Genome Length

3275060 bp

Protein-coding Genes

2975 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chorismate synthaseEU513_06090Not AvailablePositive1261207 - 126244542895.9
shikimate kinaseEU513_06095Not AvailablePositive1262331 - 126295422259.5
3-dehydroquinate synthaseEU513_06100Not AvailablePositive1262951 - 126401837888.5
fmn-binding glutamate synthase family proteinEU513_06105Not AvailableNegative1264037 - 126559955455.3
elongation factor pEU513_06110Not AvailablePositive1265779 - 126633920183.9
transcription antitermination factor nusbEU513_06115Not AvailablePositive1266343 - 126675615130.1
duf1624 domain-containing proteinEU513_06120Not AvailablePositive1266650 - 126759733806.5
hypothetical proteinEU513_06125Not AvailableNegative1267698 - 12679167274.61
hypothetical proteinEU513_06130Not AvailablePositive1267915 - 12681668905.73
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrrEU513_06135Not AvailablePositive1268306 - 126891422085.1

Displaying genes 1191 – 1200 of 3027 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.