bacterium isolate PMG_196

Kingdom

Phylum

Class

Order

Family

Genus

Description

Bacterium isolate PMG_196 is characterized by a unique genomic structure, notably possessing a single replicon. This feature suggests a streamlined genetic organization, which can influence its replication and overall cellular function. The isolate is cataloged under the accession number SDZD00000000.1, indicating its entry in genomic databases, which aids in its identification and classification. The singular replicon may confer advantages in terms of genetic stability and efficiency in cellular processes. Bacteria with one replicon often have a simpler regulatory framework, potentially allowing for quicker adaptation to environmental changes. This trait may contribute to the organism's survival strategies in varying ecological niches. In terms of ecological implications, the genetic characteristics of PMG_196 could play a role in its interactions with other microorganisms and its environment. The simplicity of its genomic architecture might facilitate rapid responses to selective pressures, such as nutrient availability or competition with other microbial species. Understanding the traits of PMG_196 can provide insights into the adaptability and ecological roles of similar bacteria in their natural habitats. The information gleaned from its accession number allows researchers to explore further genetic and functional attributes, enhancing our understanding of microbial diversity and evolution.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: bacterium isolate PMG_196 scaffold_563083, whole genome

Gene Summary

Adenine Count

1621916 bp

Thymine Count

1619408 bp

Guanine Count

1974032 bp

Cytosine Count

1987873 bp

Genome Length

7219009 bp

Protein-coding Genes

6005 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xanthine dehydrogenase molybdopterin binding subunitEON83_14205Not AvailablePositive3346372 - 334866082679.1
xanthine dehydrogenase accessory protein xdhcEON83_14210Not AvailablePositive3348660 - 334942727706.9
d-2-hydroxyacid dehydrogenaseEON83_14215Not AvailableNegative3349477 - 335045434441.6
phosphopentomutaseEON83_14220Not AvailablePositive3350677 - 335179540166.5
deoxyribose-phosphate aldolaseEON83_14225Not AvailablePositive3351815 - 335247722900.2
rna methyltransferaseEON83_14230Not AvailableNegative3352458 - 335324928585.2
bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyaseEON83_14235Not AvailablePositive3353755 - 335458830968.1
nuclear transport factor 2 family proteinEON83_14240Not AvailableNegative3354641 - 335502713819.0
xre family transcriptional regulatorEON83_14245Not AvailablePositive3355159 - 335595929602.0
rna 2'-phosphotransferaseEON83_14250Not AvailablePositive3355972 - 335652320547.4

Displaying genes 2811 – 2820 of 6076 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.