bacterium isolate PMG_181

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Phylum

Class

Order

Family

Genus

Description

Bacterium isolate PMG_181 is characterized by having a single replicon, indicating a simple genomic structure that may be typical of certain bacterial species. The genomic sequence of this isolate is accessible under the accession number SDZC00000000.1, which allows for further analysis and comparison with other bacterial genomes. The presence of a single replicon can suggest a streamlined genetic organization, which may contribute to the efficiency of cellular processes such as replication and gene expression. This trait might indicate that PMG_181 is well-adapted to its ecological niche, potentially allowing for rapid growth and reproduction in its environment. Understanding the genomic features of PMG_181 can enhance our knowledge of its biological role and ecological interactions. Further studies could explore the metabolic pathways and ecological functions of this isolate, contributing to the broader understanding of microbial diversity and ecology. The single replicon trait might also be of interest in evolutionary studies, as it could reflect the evolutionary pressures faced by this bacterium in its habitat. Overall, the genomic characteristics of PMG_181 underscore its potential significance in microbial ecology.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: bacterium isolate PMG_181 scaffold_648420, whole genome

Gene Summary

Adenine Count

950638 bp

Thymine Count

943174 bp

Guanine Count

1609363 bp

Cytosine Count

1615641 bp

Genome Length

5118875 bp

Protein-coding Genes

5174 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s1EON82_22715Not AvailablePositive4471982 - 447332350175.2
hypothetical proteinEON82_22720Not AvailableNegative4473324 - 447368112308.1
cold-shock proteinEON82_22725Not AvailablePositive4474003 - 44742067392.49
duf47 family proteinEON82_22730Not AvailablePositive4474581 - 447500616070.8
mbl fold metallo-hydrolaseEON82_22735Not AvailableNegative4475007 - 447589132771.9
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseEON82_22740Not AvailableNegative4475965 - 447668825811.6
mfs transporterEON82_22745Not AvailablePositive4476689 - 447705012131.0
class a beta-lactamase-related serine hydrolaseEON82_22750Not AvailableNegative4477176 - 447836342356.4
type vi secretion system atpase tsshEON82_22755Not AvailablePositive4478364 - 447905625756.7
hypothetical proteinEON82_22760Not AvailablePositive4479164 - 448003332329.6

Displaying genes 4471 – 4480 of 5255 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.