bacterium isolate PMG_181

Kingdom

Phylum

Class

Order

Family

Genus

Description

Bacterium isolate PMG_181 is characterized by having a single replicon, indicating a simple genomic structure that may be typical of certain bacterial species. The genomic sequence of this isolate is accessible under the accession number SDZC00000000.1, which allows for further analysis and comparison with other bacterial genomes. The presence of a single replicon can suggest a streamlined genetic organization, which may contribute to the efficiency of cellular processes such as replication and gene expression. This trait might indicate that PMG_181 is well-adapted to its ecological niche, potentially allowing for rapid growth and reproduction in its environment. Understanding the genomic features of PMG_181 can enhance our knowledge of its biological role and ecological interactions. Further studies could explore the metabolic pathways and ecological functions of this isolate, contributing to the broader understanding of microbial diversity and ecology. The single replicon trait might also be of interest in evolutionary studies, as it could reflect the evolutionary pressures faced by this bacterium in its habitat. Overall, the genomic characteristics of PMG_181 underscore its potential significance in microbial ecology.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: bacterium isolate PMG_181 scaffold_648420, whole genome

Gene Summary

Adenine Count

950638 bp

Thymine Count

943174 bp

Guanine Count

1609363 bp

Cytosine Count

1615641 bp

Genome Length

5118875 bp

Protein-coding Genes

5174 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
proteaseEON82_12855Not AvailablePositive2581336 - 258296258737.2
transcription-repair coupling factorEON82_12860Not AvailableNegative2582963 - 2585988111396.0
chrd domain-containing proteinEON82_12865Not AvailablePositive2586214 - 258678019499.6
dioxygenaseEON82_12870Not AvailableNegative2587300 - 258813331165.2
nadh-quinone oxidoreductase subunit bEON82_12875Not AvailablePositive2588217 - 258879820992.7
nadh-quinone oxidoreductase subunit nuoiEON82_12880Not AvailablePositive2588799 - 258925117515.2
hypothetical proteinEON82_12885Not AvailablePositive2589589 - 258998413826.4
hypothetical proteinEON82_12890Not AvailablePositive2590010 - 259041414394.7
valine--trna ligaseEON82_12895Not AvailablePositive2590487 - 259308198261.4
hypothetical proteinEON82_12900Not AvailableNegative2593243 - 259406129751.3

Displaying genes 2531 – 2540 of 5255 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.