bacterium isolate PMG_181

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Phylum

Class

Order

Family

Genus

Description

Bacterium isolate PMG_181 is characterized by having a single replicon, indicating a simple genomic structure that may be typical of certain bacterial species. The genomic sequence of this isolate is accessible under the accession number SDZC00000000.1, which allows for further analysis and comparison with other bacterial genomes. The presence of a single replicon can suggest a streamlined genetic organization, which may contribute to the efficiency of cellular processes such as replication and gene expression. This trait might indicate that PMG_181 is well-adapted to its ecological niche, potentially allowing for rapid growth and reproduction in its environment. Understanding the genomic features of PMG_181 can enhance our knowledge of its biological role and ecological interactions. Further studies could explore the metabolic pathways and ecological functions of this isolate, contributing to the broader understanding of microbial diversity and ecology. The single replicon trait might also be of interest in evolutionary studies, as it could reflect the evolutionary pressures faced by this bacterium in its habitat. Overall, the genomic characteristics of PMG_181 underscore its potential significance in microbial ecology.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: bacterium isolate PMG_181 scaffold_648420, whole genome

Gene Summary

Adenine Count

950638 bp

Thymine Count

943174 bp

Guanine Count

1609363 bp

Cytosine Count

1615641 bp

Genome Length

5118875 bp

Protein-coding Genes

5174 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4838 domain-containing proteinEON82_12550Not AvailablePositive2516648 - 251854971365.0
esterase family proteinEON82_12555Not AvailableNegative2518566 - 251955237103.4
pyridoxamine 5'-phosphate oxidaseEON82_12560Not AvailableNegative2519594 - 252007917573.7
hypothetical proteinEON82_12565Not AvailableNegative2520236 - 252065214870.0
rna polymerase sigma factorEON82_12570Not AvailableNegative2520670 - 252135026149.2
duf2784 family proteinEON82_12575Not AvailableNegative2521341 - 252185019302.7
d-2-hydroxyacid dehydrogenaseEON82_12580Not AvailablePositive2521762 - 252269734294.7
hypothetical proteinEON82_12585Not AvailablePositive2522794 - 252310510836.3
m20 family peptidaseEON82_12590Not AvailablePositive2523106 - 252445548961.0
glutathione peroxidaseEON82_12595Not AvailablePositive2524521 - 252501518309.3

Displaying genes 2471 – 2480 of 5255 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.