Nocardioides glacieisoli strain HLT3-15

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides glacieisoli strain HLT3-15 is characterized by having a single replicon, which simplifies its genetic analysis and manipulation compared to organisms with multiple replicons. The genomic data for this strain is cataloged under accession number SDWS00000000.1, providing a reference point for researchers interested in studying its genetic material. This strain is a member of the genus Nocardioides, which is known for its role in soil ecosystems and its potential applications in bioremediation due to its ability to degrade various organic compounds. The ecological significance of Nocardioides glacieisoli strain HLT3-15 may lie in its adaptation to cold environments, as suggested by its name, which indicates an association with glacial or cold habitats. The presence of Nocardioides species in such environments highlights their potential contributions to nutrient cycling and organic matter decomposition in cold ecosystems. Understanding the metabolic pathways and ecological roles of strains like HLT3-15 could provide insights into microbial contributions to biogeochemical processes in extreme environments. In summary, Nocardioides glacieisoli strain HLT3-15, with its single replicon and documented genomic information, represents a unique microorganism that may play a vital role in maintaining ecological balance in cold habitats. Further research on this strain could reveal its potential utility in environmental biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides glacieisoli
Strainstrain HLT3-15

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides glacieisoli strain HLT3-15

Gene Summary

Adenine Count

667100 bp

Thymine Count

666465 bp

Guanine Count

1619293 bp

Cytosine Count

1624707 bp

Genome Length

4579560 bp

Protein-coding Genes

4301 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseEUA06_02320Not AvailablePositive471056 - 47258552769.5
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseEUA06_02325Not AvailablePositive472582 - 47398546854.6
phospho-n-acetylmuramoyl-pentapeptide- transferaseEUA06_02330Not AvailablePositive473982 - 47509439777.3
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseEUA06_02335Not AvailablePositive475164 - 47663351838.9
putative lipid ii flippase ftswEUA06_02340Not AvailablePositive476672 - 47793444735.8
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseEUA06_02345Not AvailablePositive477945 - 47902436739.7
udp-n-acetylmuramate--l-alanine ligaseEUA06_02350Not AvailablePositive479021 - 48043948601.7
ftsq-type potra domain-containing proteinEUA06_02355Not AvailablePositive480432 - 48118427743.5
cell division protein ftszEUA06_02360Not AvailablePositive481417 - 48262541175.8
peptidoglycan editing factor pgefEUA06_02365Not AvailablePositive482629 - 48332423766.0

Displaying genes 461 – 470 of 4354 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.