Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna--protein-cysteine methyltransferase | EQ875_00811 | Not Available | Negative | 892070 - 892555 | 18443.3 |
| putative ribosomal n-acetyltransferase ydaf | EQ875_00812 | Not Available | Positive | 892625 - 893221 | 23453.1 |
| pyruvate kinase ii | EQ875_00813 | Not Available | Negative | 893347 - 894792 | 51426.2 |
| hth-type transcriptional regulator hexr | EQ875_00814 | Not Available | Negative | 895192 - 896046 | 31504.7 |
| protein yeez | EQ875_00815 | Not Available | Positive | 896424 - 897272 | 31234.5 |
| carboxypeptidase g2 | EQ875_00816 | Not Available | Positive | 898194 - 899324 | 40850.7 |
| hypothetical protein | EQ875_00817 | Not Available | Positive | 899643 - 900311 | 25334.6 |
| acyl-coenzyme a dehydrogenase | EQ875_00818 | Not Available | Positive | 900428 - 902704 | 83205.0 |
| enoyl-[acyl-carrier-protein] reductase | EQ875_00819 | Not Available | Positive | 902897 - 904099 | 44204.6 |
| adaptive-response sensory-kinase sasa | EQ875_00820 | Not Available | Negative | 904173 - 905519 | 50630.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


