Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_00771 | Not Available | Positive | 852076 - 852354 | 10731.1 |
| inner membrane protein yhah | EQ875_00772 | Not Available | Positive | 852375 - 852770 | 14922.4 |
| coenzyme a disulfide reductase | EQ875_00773 | Not Available | Negative | 852856 - 854508 | 60058.5 |
| hypothetical protein | EQ875_00774 | Not Available | Positive | 854738 - 855142 | 14185.0 |
| hypothetical protein | EQ875_00775 | Not Available | Positive | 855159 - 855593 | 15375.5 |
| hypothetical protein | EQ875_00776 | Not Available | Positive | 855674 - 855910 | 8601.37 |
| hypothetical protein | EQ875_00777 | Not Available | Positive | 856130 - 856303 | 6533.86 |
| tyrosine-specific transport protein | EQ875_00778 | Not Available | Positive | 856411 - 857589 | 41508.7 |
| hypothetical protein | EQ875_00779 | Not Available | Positive | 857963 - 858769 | 30600.7 |
| hypothetical protein | EQ875_00780 | Not Available | Negative | 858834 - 859361 | 19443.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


