Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | Positive | 820618 - 820693 | Not Available |
| p-aminobenzoyl-glutamate transport protein | EQ875_00742 | Not Available | Positive | 820958 - 822499 | 55226.4 |
| peptidase t | EQ875_00743 | Not Available | Positive | 822504 - 823730 | 44746.5 |
| Trna-ser | Not Available | Not Available | Positive | 823956 - 824046 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 824090 - 824174 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 824182 - 824257 | Not Available |
| putative cryptic c4-dicarboxylate transporter dcud | EQ875_00747 | Not Available | Negative | 824479 - 825846 | 47285.7 |
| hth-type transcriptional regulator cynr | EQ875_00748 | Not Available | Negative | 826169 - 827044 | 33198.4 |
| inner membrane transport protein ynfm | EQ875_00749 | Not Available | Positive | 827152 - 828360 | 43953.8 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit c | EQ875_00750 | Not Available | Negative | 828445 - 829656 | 45238.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


