Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_00721 | Not Available | Positive | 804296 - 805039 | 27339.6 |
| hypothetical protein | EQ875_00722 | Not Available | Positive | 805242 - 805397 | 5535.38 |
| phospholipase a1 | EQ875_00723 | Not Available | Negative | 805389 - 806381 | 38265.9 |
| hypothetical protein | EQ875_00724 | Not Available | Negative | 806538 - 808913 | 88882.0 |
| hypothetical protein | EQ875_00725 | Not Available | Negative | 809608 - 810297 | 26415.2 |
| hypothetical protein | EQ875_00726 | Not Available | Negative | 810529 - 811224 | 26093.3 |
| hypothetical protein | EQ875_00727 | Not Available | Negative | 811540 - 812808 | 49023.3 |
| hypothetical protein | EQ875_00728 | Not Available | Negative | 813093 - 813536 | 17035.2 |
| hypothetical protein | EQ875_00729 | Not Available | Positive | 813988 - 814281 | 10874.1 |
| hypothetical protein | EQ875_00730 | Not Available | Negative | 814343 - 814576 | 8974.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


