Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_02588 | Not Available | Negative | 2907251 - 2907577 | 10665.3 |
| hypothetical protein | EQ875_02589 | Not Available | Negative | 2907577 - 2907744 | 5719.22 |
| hypothetical protein | EQ875_02590 | Not Available | Negative | 2907745 - 2908056 | 10116.7 |
| hypothetical protein | EQ875_02591 | Not Available | Negative | 2908070 - 2908897 | 31149.7 |
| hypothetical protein | EQ875_02592 | Not Available | Negative | 2908911 - 2909036 | 4579.62 |
| Structural protein | EQ875_02593 | Not Available | Negative | 2909158 - 2909868 | 26847.4 |
| hypothetical protein | EQ875_02594 | Not Available | Negative | 2909843 - 2910304 | 16996.0 |
| hypothetical protein | EQ875_02595 | Not Available | Negative | 2910301 - 2910651 | 12810.3 |
| hypothetical protein | EQ875_02596 | Not Available | Negative | 2910641 - 2910850 | 7912.67 |
| Coil containing protein | EQ875_02597 | Not Available | Negative | 2910837 - 2912795 | 74354.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


