Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_00681 | Not Available | Positive | 761279 - 761716 | 15790.0 |
| hypothetical protein | EQ875_00682 | Not Available | Positive | 761843 - 762760 | 34400.0 |
| regulator of rpos | EQ875_00683 | Not Available | Negative | 762814 - 764058 | 46723.2 |
| sensor histidine kinase rcsc | EQ875_00684 | Not Available | Negative | 764051 - 767800 | 142043.0 |
| hypothetical protein | EQ875_00685 | Not Available | Negative | 767915 - 768133 | 8225.06 |
| oxidoreductase ydhf | EQ875_00686 | Not Available | Positive | 768286 - 769194 | 34186.0 |
| thiosulfate sulfurtransferase ynje | EQ875_00687 | Not Available | Negative | 769290 - 770594 | 48749.5 |
| hypothetical protein | EQ875_00688 | Not Available | Positive | 770877 - 771896 | 37398.5 |
| nadh pyrophosphatase | EQ875_00689 | Not Available | Negative | 771990 - 772535 | 20722.6 |
| molybdopterin-guanine dinucleotide biosynthesis adapter protein | EQ875_00690 | Not Available | Negative | 772546 - 773058 | 19361.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


