Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_00661 | Not Available | Positive | 716249 - 716722 | 17949.4 |
| zinc/cadmium/lead-transporting p-type atpase | EQ875_00662 | Not Available | Positive | 716892 - 719357 | 86963.9 |
| uridine phosphorylase | EQ875_00663 | Not Available | Positive | 719823 - 720590 | 27366.8 |
| hypothetical protein | EQ875_00664 | Not Available | Negative | 720723 - 721889 | 44396.0 |
| leucine efflux protein | EQ875_00665 | Not Available | Negative | 722360 - 723013 | 23420.7 |
| hypothetical protein | EQ875_00666 | Not Available | Positive | 723250 - 737700 | 510077.0 |
| hypothetical protein | EQ875_00667 | Not Available | Negative | 737763 - 738347 | 22282.9 |
| hypothetical protein | EQ875_00668 | Not Available | Negative | 738417 - 738614 | 7837.13 |
| hypothetical protein | EQ875_00669 | Not Available | Positive | 738926 - 741184 | 84761.7 |
| acetyltransferase | EQ875_00670 | Not Available | Positive | 741257 - 741676 | 15439.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


