Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_00651 | Not Available | Negative | 704342 - 705256 | 34721.0 |
| dna transformation protein tfox1 | EQ875_00652 | Not Available | Positive | 705806 - 706396 | 22381.2 |
| hth-type transcriptional regulator dsdc | EQ875_00653 | Not Available | Positive | 706500 - 707432 | 35173.1 |
| d-lactate dehydrogenase | EQ875_00654 | Not Available | Negative | 707455 - 708450 | 37204.6 |
| hydrogenase transcriptional regulatory protein hupr1 | EQ875_00655 | Not Available | Negative | 708611 - 709111 | 18633.1 |
| adaptive-response sensory-kinase sasa | EQ875_00656 | Not Available | Negative | 709108 - 711057 | 73572.1 |
| hypothetical protein | EQ875_00657 | Not Available | Positive | 711235 - 712548 | 47900.1 |
| inosine-5'-monophosphate dehydrogenase | EQ875_00658 | Not Available | Positive | 712727 - 713143 | 15440.9 |
| sodium-dependent dicarboxylate transporter sdcs | EQ875_00659 | Not Available | Positive | 713477 - 714892 | 50908.7 |
| adaptive-response sensory-kinase sasa | EQ875_00660 | Not Available | Positive | 714911 - 716239 | 48875.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


