Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_02578 | Not Available | Negative | 2902846 - 2903361 | 19541.8 |
| hypothetical protein | EQ875_02579 | Not Available | Negative | 2903624 - 2903734 | 4063.23 |
| hypothetical protein | EQ875_02580 | Not Available | Negative | 2903744 - 2903947 | 7802.77 |
| Hypothetical protein | EQ875_02581 | Not Available | Negative | 2903947 - 2904276 | 13002.1 |
| hypothetical protein | EQ875_02582 | Not Available | Negative | 2904280 - 2904393 | 3913.78 |
| Virion protein | EQ875_02583 | Not Available | Negative | 2904397 - 2904870 | 17160.7 |
| hypothetical protein | EQ875_02584 | Not Available | Negative | 2904863 - 2905561 | 25273.8 |
| hypothetical protein | EQ875_02585 | Not Available | Negative | 2905563 - 2906324 | 27505.8 |
| hypothetical protein | EQ875_02586 | Not Available | Negative | 2906327 - 2906878 | 19322.2 |
| hypothetical protein | EQ875_02587 | Not Available | Negative | 2906865 - 2907254 | 14934.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


