Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_00501 | Not Available | Positive | 534272 - 534745 | 16996.4 |
| hypothetical protein | EQ875_00502 | Not Available | Negative | 534804 - 535877 | 38551.8 |
| hypothetical protein | EQ875_00503 | Not Available | Positive | 536065 - 536358 | 10524.7 |
| hypothetical protein | EQ875_00504 | Not Available | Negative | 536528 - 537238 | 27037.3 |
| hypothetical protein | EQ875_00505 | Not Available | Negative | 537379 - 538038 | 25103.6 |
| hypothetical protein | EQ875_00506 | Not Available | Negative | 538184 - 541702 | 127855.0 |
| hypothetical protein | EQ875_00507 | Not Available | Positive | 542404 - 545373 | 112644.0 |
| alpha-acetolactate decarboxylase | EQ875_00508 | Not Available | Negative | 545451 - 546158 | 26326.4 |
| acetolactate synthase | EQ875_00509 | Not Available | Negative | 546181 - 547845 | 60065.8 |
| hypothetical protein | EQ875_00510 | Not Available | Positive | 547967 - 548107 | 5378.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


