Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_00441 | Not Available | Negative | 459277 - 460401 | 43410.1 |
| hypothetical protein | EQ875_00442 | Not Available | Negative | 460401 - 460892 | 19160.3 |
| cardiolipin synthase a | EQ875_00443 | Not Available | Negative | 461081 - 462544 | 55472.7 |
| hypothetical protein | EQ875_00444 | Not Available | Positive | 463058 - 464392 | 48477.6 |
| hypothetical protein | EQ875_00445 | Not Available | Positive | 464543 - 465226 | 25412.4 |
| hypothetical protein | EQ875_00446 | Not Available | Positive | 465436 - 465642 | 8240.34 |
| ribosomal rna large subunit methyltransferase k/l | EQ875_00447 | Not Available | Positive | 465767 - 466705 | 35122.1 |
| hypothetical protein | EQ875_00448 | Not Available | Negative | 466853 - 467239 | 13641.5 |
| hypothetical protein | EQ875_00449 | Not Available | Negative | 467257 - 467556 | 11053.1 |
| putative acyl-coa thioester hydrolase | EQ875_00450 | Not Available | Negative | 467690 - 468100 | 14648.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


