Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_00371 | Not Available | Negative | 386708 - 387394 | 24425.8 |
| aldehyde-alcohol dehydrogenase | EQ875_00372 | Not Available | Positive | 388147 - 390840 | 97107.9 |
| hypothetical protein | EQ875_00373 | Not Available | Negative | 390924 - 391604 | 25011.0 |
| hypothetical protein | EQ875_00374 | Not Available | Negative | 391836 - 392420 | 21734.0 |
| hypothetical protein | EQ875_00375 | Not Available | Negative | 392514 - 393488 | 35654.4 |
| hypothetical protein | EQ875_00376 | Not Available | Negative | 393492 - 395003 | 55902.5 |
| hypothetical protein | EQ875_00377 | Not Available | Negative | 395022 - 395819 | 29915.9 |
| trna u34 carboxymethyltransferase | EQ875_00378 | Not Available | Negative | 395908 - 396885 | 37806.3 |
| carboxy-s-adenosyl-l-methionine synthase | EQ875_00379 | Not Available | Negative | 396901 - 397629 | 27204.6 |
| hypothetical protein | EQ875_00380 | Not Available | Negative | 397801 - 398697 | 34071.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


