Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_00280 | Not Available | Negative | 287396 - 288928 | 58636.3 |
| hypothetical protein | EQ875_00281 | Not Available | Negative | 289195 - 289362 | 5967.15 |
| primosomal replication protein n'' | EQ875_00282 | Not Available | Negative | 289423 - 289974 | 21706.2 |
| putative membrane transporter protein yfca | EQ875_00283 | Not Available | Negative | 289986 - 290759 | 27460.3 |
| putative atp-dependent helicase ding | EQ875_00284 | Not Available | Negative | 290795 - 292870 | 78176.9 |
| porin-like protein h | EQ875_00285 | Not Available | Positive | 293403 - 294407 | 36733.4 |
| hypothetical protein | EQ875_00286 | Not Available | Positive | 294549 - 295190 | 23609.0 |
| hypothetical protein | EQ875_00287 | Not Available | Negative | 295282 - 295647 | 13752.3 |
| inner membrane protein yban | EQ875_00288 | Not Available | Positive | 295977 - 296375 | 14860.0 |
| adenine phosphoribosyltransferase | EQ875_00289 | Not Available | Positive | 296547 - 297092 | 19747.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


